- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
No description available
Gene families : OG0001771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001771_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo407198 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G26820 | RNS3 | ribonuclease 3 | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g15509 | No alias | T2-type RNase *(RNS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G011400.1 | ATRNS1, RNS1,... | T2-type RNase *(RNS) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Cre03.g160953 | PGP1, ABCB1, ATPGP1 | No description available | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01010193001 | ATRNS1, RNS1 | Extracellular ribonuclease LE OS=Solanum lycopersicum | 0.02 | OrthoFinder output from all 47 species | |
| Gb_27893 | ATRNS1, RNS1 | Ribonuclease 1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30836 | ATRNS1, RNS1 | Ribonuclease 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g43670.1 | ATRNS1, RNS1,... | Ribonuclease 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04568 | ATRNS1, RNS1 | T2-type RNase *(RNS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g30833 | ATRNS1, RNS1 | T2-type RNase *(RNS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g08570.1 | ATRNS1, RNS1 | Ribonuclease 1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g005640.3.1 | Solyc04g005640 | Intracellular ribonuclease LX OS=Solanum lycopersicum... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g007940.3.1 | ATRNS1, RNS1,... | Intracellular ribonuclease LX OS=Solanum lycopersicum... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018966_P001 | RNS2, Zm00001e018966 | Ribonuclease 2 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |