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  5. Smo406591

Smo406591


Description : Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.DAC factor


Gene families : OG0007052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo406591
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00166740 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
AT3G17930 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g011271 No alias protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Aev_g04394 No alias protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Ala_g00365 No alias protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Aop_g21364 No alias protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Aspi01Gene30737.t2 Aspi01Gene30737 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Cba_g08738 No alias protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Cre01.g000850 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Len_g11472 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Msp_g12301 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Nbi_g00338 No alias protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016133 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Spa_g03184 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021562 DUF3007 77 172
No external refs found!