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  5. Smo405772

Smo405772


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0003467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo405772

Target Alias Description ECC score Gene Family Method Actions
Als_g15679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0054.g033815 No alias not classified & original description: CDS=1-1470 0.03 OrthoFinder output from all 47 species
Dac_g01665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g17870.1 LOC_Os08g17870 Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g08988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 591 730
No external refs found!