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  5. Smo404596

Smo404596 (TGA2, AHBP-1B)


Aliases : TGA2, AHBP-1B

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.TGA transcription factor activity.TGA transcription factor


Gene families : OG0000342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo404596

Target Alias Description ECC score Gene Family Method Actions
AT1G08320 bZIP21, TGA9 bZIP transcription factor family protein 0.02 OrthoFinder output from all 47 species
Adi_g057891 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25198 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23945 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08043 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g37760 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77322 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Ceric.23G046300.1 TGA2, AHBP-1B,... TGA-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g37725 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21289 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011929001 PAN RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
LOC_Os06g15480.2 PAN, LOC_Os06g15480 transcription factor (bZIP). transcription factor (TGA).... 0.04 OrthoFinder output from all 47 species
Len_g17321 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16058 No alias TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16059 No alias TGA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51602 No alias TGA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g011670.3.1 TGA1, Solyc04g011670 transcription factor (bZIP). transcription factor (TGA) 0.03 OrthoFinder output from all 47 species
Solyc10g080770.3.1 TGA2, AHBP-1B,... transcription factor (bZIP). transcription factor (TGA).... 0.02 OrthoFinder output from all 47 species
Zm00001e014085_P001 TGA10, bZIP65,... transcription factor (bZIP). transcription factor (TGA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR025422 TGA_domain 177 252
No external refs found!