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Aliases : PUB25
Description : U-box domain-containing protein 25 OS=Arabidopsis thaliana
Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00257160 | PUB26,... | U-box domain-containing protein 25 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g077174 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g02169 | PUB23 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18167 | PUB26 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g20058 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g37454 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g38062 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g12715 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55875 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g15330 | PUB26 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene17992.t1 | PUB25, Aspi01Gene17992 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene27391.t1 | PUB26, Aspi01Gene27391 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene44311.t1 | PUB22, Aspi01Gene44311 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44809.t1 | PUB25, Aspi01Gene44809 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g78214 | PUB25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01521 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g04516 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03660 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06700 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18076 | PUB25 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011616001 | CMPG1, ATCMPG1 | U-box domain-containing protein 20 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01031720001 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037585001 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g13010.1 | LOC_Os03g13010 | U-box domain-containing protein 75 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g34030.1 | PUB23, LOC_Os04g34030 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g01213 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10425865g0010 | PUB25 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432179g0010 | PUB22 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_33190g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_48004g0010 | No alias | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_5536318g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g11730.1 | PUB25 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g11020.1 | PUB25 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06628 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08919 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10378 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g21834 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42463 | PUB23 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g12004 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g27483 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c24_16470V3.1 | ATPUB17, PUB17,... | RING/U-box superfamily protein with ARM repeat domain | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0064.g015794 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original... | 0.04 | OrthoFinder output from all 47 species | |
| Smo105050 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g009330.1.1 | PUB22, Solyc01g009330 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g57248 | PUB29, ATPUB29 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06727 | PUB26 | U-Box-group-III E3 ubiquiTin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022698_P001 | PUB26, Zm00001e022698 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |