- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
No description available
Gene families : OG0005493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005493_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo268642 | |
| Cluster | HCCA: Cluster_60 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G01160 | No alias | FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12706 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001428.2 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Cre10.g452500 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07705 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01007226001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g34740.1 | LOC_Os07g34740 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_9632g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g25070.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31908 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g083470.3.1 | Solyc02g083470 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0034457 | Mpp10 complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012580 | NUC153 | 570 | 593 |
| No external refs found! |