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  5. Smo235014

Smo235014 (POK, TTD8, ATVPS52)


Aliases : POK, TTD8, ATVPS52

Description : Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS52/POK component


Gene families : OG0004170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo235014
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT1G71270 POK, TTD8, ATVPS52 Vps52 / Sac2 family 0.11 OrthoFinder output from all 47 species
Adi_g114583 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Ala_g13519 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.04 OrthoFinder output from all 47 species
Als_g22344 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.04 OrthoFinder output from all 47 species
Aob_g16191 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Ceric.05G039600.1 POK, TTD8,... component *(VPS52/POK) of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001003.6 POK, TTD8, ATVPS52 Vacuolar protein sorting-associated protein 52 A... 0.01 OrthoFinder output from all 47 species
Cre08.g367200 POK, TTD8, ATVPS52 Vesicle trafficking.target membrane tethering.GARP/EARP... 0.04 OrthoFinder output from all 47 species
Dcu_g01774 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.05 OrthoFinder output from all 47 species
Ehy_g03868 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
GSVIVT01012102001 POK, TTD8, ATVPS52 Vesicle trafficking.target membrane tethering.GARP/EARP... 0.04 OrthoFinder output from all 47 species
Gb_30516 POK, TTD8, ATVPS52 component VPS52/POK of GARP/EARP... 0.02 OrthoFinder output from all 47 species
LOC_Os03g30460.1 POK, TTD8,... component VPS52/POK of GARP/EARP... 0.14 OrthoFinder output from all 47 species
Lfl_g03261 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.05 OrthoFinder output from all 47 species
MA_196188g0010 POK, TTD8, ATVPS52 Vacuolar protein sorting-associated protein 52 A... 0.03 OrthoFinder output from all 47 species
Mp6g21530.1 POK, TTD8, ATVPS52 component VPS52/POK of GARP/EARP... 0.04 OrthoFinder output from all 47 species
Nbi_g16706 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Pir_g08942 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Solyc02g094090.4.1 POK, TTD8,... component VPS52/POK of GARP/EARP... 0.08 OrthoFinder output from all 47 species
Spa_g15916 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.07 OrthoFinder output from all 47 species
Tin_g04119 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Zm00001e038047_P004 POK, TTD8,... component VPS52/POK of GARP/EARP... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007258 Vps52 74 568
No external refs found!