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  5. Smo230251

Smo230251


Description : Translation factor GUF1 homolog, mitochondrial OS=Ricinus communis


Gene families : OG0002290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo230251
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AT5G39900 No alias Small GTP-binding protein 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.140 No alias Translation factor GUF1 homolog, mitochondrial OS=Sorghum bicolor 0.02 OrthoFinder output from all 47 species
Dcu_g05714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011357001 No alias Translation factor GUF1 homolog, mitochondrial... 0.03 OrthoFinder output from all 47 species
LOC_Os06g05250.2 LOC_Os06g05250 Translation factor GUF1 homolog, mitochondrial OS=Oryza... 0.07 OrthoFinder output from all 47 species
Zm00001e036519_P002 Zm00001e036519 Translation factor GUF1 homolog, mitochondrial... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013842 LepA_CTD 540 646
No external refs found!