Smo180600 (RPT3)


Aliases : RPT3

Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT3 regulatory component


Gene families : OG0002973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002973_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo180600

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.46 RPT3 26S proteasome regulatory subunit 6B homolog... 0.02 OrthoFinder output from all 47 species
Cre09.g402450 RPT3 Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder output from all 47 species
LOC_Os02g21970.1 RPT3, LOC_Os02g21970 regulatory component RPT3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp8g10830.1 RPT3 regulatory component RPT3 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Zm00001e014107_P001 RPT3, Zm00001e014107 regulatory component RPT3 of 26S proteasome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!