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  5. Smo180018

Smo180018


Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.alpha subunit


Gene families : OG0001704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo180018
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT1G29310 No alias SecY protein transport family protein 0.03 OrthoFinder output from all 47 species
Adi_g013924 No alias subunit alpha of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
Als_g03659 No alias subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Als_g04301 No alias subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001076 No alias subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037166 No alias subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Cba_g12922 No alias subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Cre03.g171350 No alias Protein translocation.endoplasmic... 0.03 OrthoFinder output from all 47 species
GSVIVT01014171001 No alias Protein translocation.endoplasmic... 0.03 OrthoFinder output from all 47 species
LOC_Os09g17830.1 LOC_Os09g17830 subunit alpha of co-translational insertion system Sec61... 0.05 OrthoFinder output from all 47 species
MA_103288g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g12540.1 No alias subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Ore_g29860 No alias subunit alpha of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
Pir_g13513 No alias subunit alpha of co-translational insertion system Sec61... 0.04 OrthoFinder output from all 47 species
Pnu_g32526 No alias subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Ppi_g03054 No alias subunit alpha of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
Solyc02g072130.3.1 Solyc02g072130 subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Solyc10g007390.3.1 Solyc10g007390 subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Spa_g07155 No alias subunit alpha of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
Spa_g18550 No alias subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Spa_g24334 No alias subunit alpha of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
Spa_g57083 No alias subunit alpha of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
Zm00001e000834_P001 Zm00001e000834 subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Zm00001e005773_P002 Zm00001e005773 subunit alpha of co-translational insertion system Sec61... 0.06 OrthoFinder output from all 47 species
Zm00001e038731_P002 Zm00001e038731 subunit alpha of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019561 Translocon_Sec61/SecY_plug_dom 42 76
No external refs found!