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  5. Smo177574

Smo177574 (RPL15)


Aliases : RPL15

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL15 component


Gene families : OG0007453 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo177574
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT3G25920 RPL15 ribosomal protein L15 0.07 OrthoFinder output from all 47 species
Adi_g039878 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Als_g01589 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g27570 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010672 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g09914 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.25G066500.1 RPL15, Ceric.25G066500 component *(uL15c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020934.40 RPL15 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Cre14.g612450 RPL15 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Dac_g10212 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g43892 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ehy_g09628 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
GSVIVT01011891001 RPL15 Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
LOC_Os03g12020.1 RPL15, LOC_Os03g12020 component psRPL15 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Len_g08716 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Lfl_g24787 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_648g0010 RPL15 component psRPL15 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Mp1g23700.1 RPL15 component psRPL15 of large ribosomal subunit proteome 0.09 OrthoFinder output from all 47 species
Msp_g04395 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Nbi_g39773 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g15215 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pnu_g08064 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c20_9200V3.1 RPL15, Pp3c20_9200 ribosomal protein L15 0.03 OrthoFinder output from all 47 species
Pp3c24_11450V3.1 RPL15, Pp3c24_11450 ribosomal protein L15 0.03 OrthoFinder output from all 47 species
Pp3c8_18220V3.1 RPL15, Pp3c8_18220 ribosomal protein L15 0.03 OrthoFinder output from all 47 species
Ppi_g00735 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001664 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sam_g09170 No alias component *(uL15c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sam_g09171 No alias component *(uL15c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Solyc05g009370.4.1 RPL15, Solyc05g009370 component psRPL15 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Spa_g06473 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e000867_P001 RPL15, Zm00001e000867 component psRPL15 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 92 223
No external refs found!