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  5. Smo171333

Smo171333 (FUS1, EMB168, DET340,...)


Aliases : FUS1, EMB168, DET340, ATCOP1, COP1

Description : External stimuli response.light.red/far red light.COP1-SPA light signal transduction ubiquitin E3 ligase complex.COP1 component


Gene families : OG0000638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo171333

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00174010 SPA3,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04009.t1 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Aspi01Gene13976.t2 SPA3, Aspi01Gene13976 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Aspi01Gene38259.t1 SPA3, Aspi01Gene38259 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53620.t1 SPA1, Aspi01Gene53620 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Cre02.g085050 FUS1, EMB168,... E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g20526 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Dde_g09629 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Ehy_g09223 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
GSVIVT01007271001 FUS1, EMB168,... External stimuli response.light.red/far red... 0.03 OrthoFinder output from all 47 species
GSVIVT01020559001 SPA3 Protein modification.phosphorylation.PEK kinase 0.04 OrthoFinder output from all 47 species
LOC_Os01g52640.3 SPA4, LOC_Os01g52640 protein kinase (PEK) 0.06 OrthoFinder output from all 47 species
LOC_Os05g49590.1 SPA1, LOC_Os05g49590 protein kinase (PEK). regulator component SPA of... 0.02 OrthoFinder output from all 47 species
Lfl_g12926 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Msp_g14662 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Pir_g13039 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Ppi_g03935 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Sam_g08955 No alias component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Sam_g30164 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Solyc07g063120.4.1 SPA3, Solyc07g063120 protein kinase (PEK). regulator component SPA of... 0.05 OrthoFinder output from all 47 species
Solyc12g013840.3.1 SPA3, Solyc12g013840 protein kinase (PEK). regulator component SPA of... 0.04 OrthoFinder output from all 47 species
Zm00001e015983_P001 FUS1, EMB168,... protein kinase (PEK). component COP1 of COP1-SPA E3... 0.04 OrthoFinder output from all 47 species
Zm00001e019928_P005 SPA4, Zm00001e019928 protein kinase (PEK). regulator component SPA of... 0.03 OrthoFinder output from all 47 species
Zm00001e028209_P002 SPA4, Zm00001e028209 protein kinase (PEK). regulator component SPA of... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 427 463
No external refs found!