1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo170974

Smo170974 (AFB2)


Aliases : AFB2

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo170974
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Aob_g03491 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
LOC_Os05g37690.1 COI1, LOC_Os05g37690 component COI of jasmonic acid receptor complex 0.05 OrthoFinder output from all 47 species
Lfl_g03214 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
MA_63147g0010 COI1 Coronatine-insensitive protein homolog 1b OS=Oryza... 0.07 OrthoFinder output from all 47 species
Pnu_g18805 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Pnu_g20969 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Spa_g54531 COI1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e031742_P001 COI1, Zm00001e031742 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 169 189
No external refs found!