1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo170737

Smo170737


Description : Vesicle trafficking.endomembrane trafficking.vacuolar sorting.AP-4 vacuole cargo adaptor complex.AP4E large epsilon subunit


Gene families : OG0004559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004559_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo170737
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT1G31730 No alias Adaptin family protein 0.03 OrthoFinder output from all 47 species
Aev_g02590 No alias large subunit epsilon of AP-4 vacuole cargo adaptor... 0.02 OrthoFinder output from all 47 species
Ala_g06245 No alias large subunit epsilon of AP-4 vacuole cargo adaptor... 0.05 OrthoFinder output from all 47 species
Als_g22306 No alias large subunit epsilon of AP-4 vacuole cargo adaptor... 0.02 OrthoFinder output from all 47 species
Aob_g03588 No alias large subunit epsilon of AP-4 vacuole cargo adaptor... 0.02 OrthoFinder output from all 47 species
Azfi_s0048.g030676 No alias large subunit epsilon of AP-4 vacuole cargo adaptor... 0.03 OrthoFinder output from all 47 species
Ceric.09G002800.1 Ceric.09G002800 large subunit epsilon of AP-4 vacuole cargo adaptor... 0.06 OrthoFinder output from all 47 species
Cre06.g310000 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder output from all 47 species
Dcu_g01987 No alias large subunit epsilon of AP-4 vacuole cargo adaptor... 0.03 OrthoFinder output from all 47 species
Dde_g28708 No alias large subunit epsilon of AP-4 vacuole cargo adaptor... 0.03 OrthoFinder output from all 47 species
Ehy_g19814 No alias large subunit epsilon of AP-4 vacuole cargo adaptor... 0.02 OrthoFinder output from all 47 species
GSVIVT01036887001 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.07 OrthoFinder output from all 47 species
LOC_Os01g68750.1 LOC_Os01g68750 large subunit epsilon of AP-4 vacuole cargo adaptor complex 0.08 OrthoFinder output from all 47 species
Lfl_g03471 No alias large subunit epsilon of AP-4 vacuole cargo adaptor... 0.07 OrthoFinder output from all 47 species
MA_10436474g0010 No alias large subunit epsilon of AP-4 vacuole cargo adaptor complex 0.04 OrthoFinder output from all 47 species
MA_39759g0020 No alias AP-4 complex subunit epsilon OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_41176g0010 No alias AP-4 complex subunit epsilon OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g10170.1 No alias large subunit epsilon of AP-4 vacuole cargo adaptor complex 0.02 OrthoFinder output from all 47 species
Ore_g25713 No alias large subunit epsilon of AP-4 vacuole cargo adaptor... 0.03 OrthoFinder output from all 47 species
Ppi_g03985 No alias large subunit epsilon of AP-4 vacuole cargo adaptor... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002513 No alias large subunit epsilon of AP-4 vacuole cargo adaptor... 0.02 OrthoFinder output from all 47 species
Solyc08g075310.4.1 Solyc08g075310 large subunit epsilon of AP-4 vacuole cargo adaptor complex 0.07 OrthoFinder output from all 47 species
Zm00001e018853_P002 Zm00001e018853 large subunit epsilon of AP-4 vacuole cargo adaptor complex 0.06 OrthoFinder output from all 47 species
Zm00001e028486_P002 Zm00001e028486 large subunit epsilon of AP-4 vacuole cargo adaptor complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 52 595
No external refs found!