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Description : Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana
Gene families : OG0000929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000929_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo170682 | |
| Cluster | HCCA: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00249170 | evm_27.TU.AmTr_v1... | Uncharacterized membrane protein At1g16860... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00154670 | evm_27.TU.AmTr_v1... | Uncharacterized membrane protein At1g16860... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G16860 | No alias | Ubiquitin-specific protease family C19-related protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g014699 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g074098 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g11688 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g18177 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g02232 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g08556 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g14842 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g01771 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.09 | OrthoFinder output from all 47 species | |
| Als_g15204 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g31738 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g49969 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g11781 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g29061 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02864 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g03201 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene33794.t1 | Aspi01Gene33794 | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene53385.t1 | Aspi01Gene53385 | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene64060.t1 | Aspi01Gene64060 | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008401 | No alias | not classified & original description: CDS=558-1895 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0073.g037099 | No alias | not classified & original description: CDS=1146-2774 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g05871 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G017500.1 | Ceric.10G017500 | regulatory protein *(SHOU4) involved in cellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.12G073600.1 | Ceric.12G073600 | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G069000.1 | Ceric.21G069000 | not classified & original description: pacid=50602627... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g01677 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03755 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g08975 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g11604 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14768 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g02263 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g03733 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05868 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g07030 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g12547 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_22203 | No alias | SHOU4-type cellulose synthase CSC-interactive protein | 0.03 | OrthoFinder output from all 47 species | |
| Gb_33458 | No alias | SHOU4-type cellulose synthase CSC-interactive protein | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os04g51710.1 | LOC_Os04g51710 | SHOU4-type cellulose synthase CSC-interactive protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g13350.1 | LOC_Os08g13350 | SHOU4-type cellulose synthase CSC-interactive protein | 0.06 | OrthoFinder output from all 47 species | |
| Len_g04751 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g34125 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06128 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g15628 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g29225 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.07 | OrthoFinder output from all 47 species | |
| MA_10432016g0010 | No alias | SHOU4-type cellulose synthase CSC-interactive protein | 0.02 | OrthoFinder output from all 47 species | |
| MA_9168g0010 | No alias | SHOU4-type cellulose synthase CSC-interactive protein | 0.1 | OrthoFinder output from all 47 species | |
| Msp_g11445 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g05342 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10144 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.08 | OrthoFinder output from all 47 species | |
| Nbi_g25398 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g09783 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16050 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26643 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01330 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g11301 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g45908 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g04537 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g16981 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000434 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0130.g022028 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11303 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16842 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g014680.4.1 | Solyc04g014680 | Uncharacterized membrane protein At1g16860... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc12g017450.2.1 | Solyc12g017450 | SHOU4-type cellulose synthase CSC-interactive protein | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g16426 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16427 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g18005 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g22872 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10031 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g25164 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007013_P001 | Zm00001e007013 | SHOU4-type cellulose synthase CSC-interactive protein | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022289_P002 | Zm00001e022289 | SHOU4-type cellulose synthase CSC-interactive protein | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e040067_P002 | Zm00001e040067 | SHOU4-type cellulose synthase CSC-interactive protein | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041596_P001 | Zm00001e041596 | SHOU4-type cellulose synthase CSC-interactive protein | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004568 | chitinase activity | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |