Smo166437


No description available


Gene families : OG0005274 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005274_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo166437
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT1G16080 No alias unknown protein; LOCATED IN: apoplast, chloroplast... 0.03 OrthoFinder output from all 47 species
Ala_g04394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04843 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g05085 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g08129 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.06G037500.1 Ceric.06G037500 not classified & original description: pacid=50620266... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000293.24 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre10.g435850 No alias No description available 0.06 OrthoFinder output from all 47 species
Dac_g06665 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g10490 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01016093001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os08g16570.1 LOC_Os08g16570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g08101 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g07269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436923g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g14820.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06637 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g03100 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g06985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16717 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g12984 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g10708 No alias protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Zm00001e022269_P001 Zm00001e022269 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!