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  5. Smo165828

Smo165828 (RPH1)


Aliases : RPH1

No description available


Gene families : OG0006050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo165828
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT2G48070 RPH1 resistance to phytophthora 1 0.02 OrthoFinder output from all 47 species
Adi_g077595 RPH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24131 RPH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11899 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22056 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0268.g061074 RPH1 not classified & original description: CDS=29-781 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001374.9 RPH1 No description available 0.02 OrthoFinder output from all 47 species
Cre03.g145207 RPH1 No description available 0.02 OrthoFinder output from all 47 species
Dac_g24608 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11977 RPH1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g06539 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011060001 RPH1 No description available 0.02 OrthoFinder output from all 47 species
Ore_g14460 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18881 RPH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017006 RPH1 not classified & original description: CDS=688-1419 0.03 OrthoFinder output from all 47 species
Solyc05g055850.3.1 RPH1, Solyc05g055850 no description available(sp|m1c5m7|rph1_soltu : 397.0) 0.04 OrthoFinder output from all 47 species
Spa_g11278 RPH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e031640_P002 RPH1, Zm00001e031640 no description available(sp|m1c5m7|rph1_soltu : 241.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!