Smo128732

Description : Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit delta

Gene families : OG0001923 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001923_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo128732

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00232380	ATPD,...	Photosynthesis.photophosphorylation.ATP synthase...	0.07	OrthoFinder output from all 47 species
AT4G09650	ATPD	ATP synthase delta-subunit gene	0.04	OrthoFinder output from all 47 species
Adi_g040501	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
Aev_g05188	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Ala_g16354	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Aob_g04089	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Aob_g05620	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
Aop_g01177	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Aspi01Gene30200.t1	ATPD, Aspi01Gene30200	subunit delta of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Aspi01Gene41011.t1	ATPD, Aspi01Gene41011	subunit delta of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Azfi_s0073.g037144	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
Cba_g12515	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Ceric.27G011900.1	ATPD, Ceric.27G011900	subunit delta of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
Ceric.36G009700.1	ATPD, Ceric.36G009700	subunit delta of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Cre11.g467569	ATPD	Photosynthesis.photophosphorylation.ATP synthase...	0.02	OrthoFinder output from all 47 species
Dac_g03133	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.07	OrthoFinder output from all 47 species
Dac_g05575	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Dcu_g00763	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
Dcu_g00798	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.07	OrthoFinder output from all 47 species
Dde_g04263	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Ehy_g08260	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
GSVIVT01001595001	ATPD	Photosynthesis.photophosphorylation.ATP synthase...	0.04	OrthoFinder output from all 47 species
Gb_38201	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
LOC_Os02g51470.3	ATPD, LOC_Os02g51470	subunit delta of peripheral CF1 subcomplex of ATP...	0.09	OrthoFinder output from all 47 species
LOC_Os03g52660.1	LOC_Os03g52660	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Len_g02669	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
MA_10744g0010	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
MA_657g0010	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Mp3g05790.1	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Msp_g05321	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Nbi_g12483	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Ore_g18978	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Ore_g27681	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Pir_g00419	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Pnu_g09378	No alias	subunit delta of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Ppi_g02890	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022065	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
Sam_g25341	No alias	subunit delta of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Sam_g38465	No alias	subunit delta of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Solyc05g050500.1.1	Solyc05g050500	ATP synthase delta chain, chloroplastic OS=Spinacia...	0.04	OrthoFinder output from all 47 species
Solyc12g056830.1.1	ATPD, Solyc12g056830	subunit delta of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Spa_g07561	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Spa_g07562	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Spa_g07563	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Tin_g03812	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
Zm00001e023884_P001	ATPD, Zm00001e023884	subunit delta of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005261	monoatomic cation channel activity	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015252	proton channel activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0009512	cytochrome b6f complex	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000711	ATPase_OSCP/dsu	3	177

External Links

No external refs found!

Smo128732

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation