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  5. Smo124882

Smo124882 (PBF1)


Aliases : PBF1

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component


Gene families : OG0004409 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004409_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo124882
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT3G60820 PBF1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.03 OrthoFinder output from all 47 species
Aop_g00288 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cba_g31823 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.5 PBF1 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Cre26.g756797 PBF1 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Dde_g01948 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Zm00001e010121_P001 PBF1, Zm00001e010121 component beta type-6 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 16 211
No external refs found!