Aliases : PAT2
Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-3 Golgi to vacuole cargo adaptor complex.AP3B large beta subunit
Gene families : OG0006164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006164_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo118138 | |
Cluster | HCCA: Cluster_93 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G55480 | PAT2 | protein affected trafficking 2 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g077141 | PAT2 | large subunit beta of AP-3 Golgi to vacuole cargo... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g12108 | PAT2 | large subunit beta of AP-3 Golgi to vacuole cargo... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.28G061600.1 | PAT2, Ceric.28G061600 | large subunit beta of AP-3 Golgi to vacuole cargo... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g19428 | PAT2 | large subunit beta of AP-3 Golgi to vacuole cargo... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01016531001 | PAT2 | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.04 | OrthoFinder output from all 47 species | |
Gb_19472 | PAT2 | large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g74180.1 | PAT2, LOC_Os01g74180 | large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex | 0.03 | OrthoFinder output from all 47 species | |
Mp6g07170.1 | PAT2 | large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex | 0.03 | OrthoFinder output from all 47 species | |
Ore_g20296 | PAT2 | large subunit beta of AP-3 Golgi to vacuole cargo... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g10545 | No alias | large subunit beta of AP-3 Golgi to vacuole cargo... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g043030.4.1 | PAT2, Solyc06g043030 | large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e029209_P001 | PAT2, Zm00001e029209 | large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | HCCA |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
CC | GO:0005856 | cytoskeleton | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007062 | sister chromatid cohesion | IEP | HCCA |
BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0022402 | cell cycle process | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1903047 | mitotic cell cycle process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002553 | Clathrin/coatomer_adapt-like_N | 22 | 576 |
No external refs found! |