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Aliases : APE1
Description : Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor
Gene families : OG0005042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G38660 | APE1 | acclimation of photosynthesis to environment | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g042602 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g05820 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g01434 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g04161 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g11675 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g00474 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.11 | OrthoFinder output from all 47 species | |
| Aspi01Gene37157.t1 | APE1, Aspi01Gene37157 | photosynthetic acclimation APE acclimation factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g36758 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.36G020000.1 | APE1, Ceric.36G020000 | photosynthetic acclimation APE acclimation factor &... | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000241.155 | APE1 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| Cre16.g665250 | APE1 | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g08395 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g15090 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g12570 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07374 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01036442001 | APE1 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_11215 | APE1 | photosynthetic acclimation APE acclimation factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g27010.1 | APE1, LOC_Os08g27010 | photosynthetic acclimation APE acclimation factor | 0.09 | OrthoFinder output from all 47 species | |
| Len_g00377 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g00668 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.07 | OrthoFinder output from all 47 species | |
| Mp1g12820.1 | APE1 | photosynthetic acclimation APE acclimation factor | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g00353 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g30376 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g17711 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g12433 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g59760 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.07 | OrthoFinder output from all 47 species | |
| Pnu_g12820 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32168 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc03g034170.4.1 | APE1, Solyc03g034170 | photosynthetic acclimation APE acclimation factor | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g11785 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.14 | OrthoFinder output from all 47 species | |
| Tin_g12102 | APE1 | photosynthetic acclimation APE acclimation factor &... | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e004293_P003 | APE1, Zm00001e004293 | photosynthetic acclimation APE acclimation factor | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003747 | translation release factor activity | IEP | HCCA |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | HCCA |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
| BP | GO:0006553 | lysine metabolic process | IEP | HCCA |
| BP | GO:0006813 | potassium ion transport | IEP | HCCA |
| MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009085 | lysine biosynthetic process | IEP | HCCA |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021275 | DUF2854 | 93 | 243 |
| No external refs found! |