Sequence Description Alias PCC hrr Smo74261 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum PDS3, PDS, PDE226 0.9283140993455217 9 Smo423707 0.9242636349999196 23 Smo437225 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase STN8 0.9212502554124558 14 Smo131328 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase ATCPO-I, LIN2, HEMF1 0.9188409543904925 4 Smo174616 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component V157, PDE166, ALB1, CHLD, ALB-1V 0.9153338803360352 11 Smo63559 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana 0.9144977716737306 15 Smo448328 Photosynthesis.photophosphorylation.pseudo-cyclic electron flow.flavodiiron protein 0.9127126414548742 24 Smo73285 0.9098932680674916 11 Smo143134 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL1 component 0.9091116061945986 18 Smo141857 Protein biosynthesis.organelle translation machineries.translation termination.PrfA-type peptide chain release factor APG3 0.9086052619588345 10 Smo55147 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase 0.907351906717496 15 Smo429956 0.9065108181928286 12 Smo130316 Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana TIC55-IV, ACD1-LIKE, PTC52 0.9050904235135285 13 Smo51301 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) ATKEA3, KEA3 0.9050226523967122 25 Smo438672 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME2 0.9036078373034617 15 Smo90536 Protein modification.S-glutathionylation and deglutathionylation.glutathione S-transferase activities.class lambda 0.9035412523702909 32 Smo404832 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC5 component PTAC5 0.9026343311077646 19 Smo413416 Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana FZL 0.9015523956856663 18 Smo271018 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component RPS1, ARRPS1 0.9014574211812052 21 Smo174833 Photosynthesis.calvin cycle.fructose-1,6-bisphosphatase HCEF1 0.9013851711858122 20 Smo93150 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase STN8 0.9003132775125106 21 Smo97903 Photosynthesis.photorespiration.glycerate kinase 0.899796563760514 22 Smo25109 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase 0.8997536485685296 23 Smo98333 External stimuli response.drought.stomatal closure signalling.CAS calcium sensor 0.898127322912733 24 Smo271457 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPB 0.8976377825482411 27 Smo448162 PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana 0.8926587863208447 34 Smo96317 Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana 0.8922012207277222 27 Smo227615 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein HCF136 0.8918411114357213 34 Smo75294 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR1 crr1 0.8907393659503015 29 Smo60716 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor emb2726 0.889580079153875 38 Smo439533 0.889214397346545 31 Smo440512 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatA component 0.8889388259319141 32 Smo92189 Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase 0.8881854421548316 33 Smo235693 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein 0.8877786476191125 56 Smo182694 Photosynthesis.calvin cycle.phosphoribulokinase PRK 0.8875001935900713 46 Smo229587 Prolycopene isomerase 1, chloroplastic OS=Oncidium hybrid cultivar 0.8857652103794227 36 Smo174737 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana 0.8842946992921535 37 Smo125820 Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana 0.8833985126731783 38 Smo91144 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.HCF101 component HCF101 0.8813221483360614 46 Smo437910 0.8808912943444434 40 Smo438082 Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease 0.8803475977549213 41 Smo144149 PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana 0.8790922418385074 42 Smo64169 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB1/NDF1 component 0.8787712473437217 43 Smo99338 Photosynthesis.calvin cycle.sedoheptulose-1,7-bisphosphatase SBPASE 0.8786914792252657 44 Smo443172 Fruit protein pKIWI502 OS=Actinidia deliciosa 0.8781124793736096 45 Smo177176 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana 0.8778133891587956 46 Smo169254 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana MRL1 0.8760350023871502 48 Smo185868 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CSP41A 0.8752151031006847 48 Smo417198 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.CIN phosphatase PGLP1, ATPGLP1 0.875061105618043 49 Smo439518 Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana 0.8741017622522831 50 Smo439600 ABC transporter F family member 5 OS=Arabidopsis thaliana ATGCN5, GCN5 0.8734652796030318 54 Smo270723 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component CPSRP43, CAO 0.8729496541205413 52 Smo418548 Haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 OS=Arabidopsis thaliana 0.8723315739617058 53 Smo413766 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.bifunctional methylthioribulose-1-phosphate dehydratase and enolase-phosphatase 0.8721260920994721 54 Smo73714 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.87111978102607 55 Smo403333 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana LHCA5 0.870649618231568 56 Smo442013 Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana 0.8704127460124063 57 Smo181802 L-gulonolactone oxidase 3 OS=Arabidopsis thaliana 0.8699996499223841 58 Smo173339 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein ATSULA, GC1, SULA 0.8689869753610842 71 Smo405876 0.8689332728023158 60 Smo64370 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor 0.8672804881807747 64 Smo272095 Photosynthesis.photorespiration.glycine cleavage system.T-protein aminomethyltransferase component 0.867095102709535 62 Smo63596 Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana 0.8665720993772245 63 Smo103361 0.8664083115836012 64 Smo437924 Probable indole-3-acetic acid-amido synthetase GH3.12 OS=Oryza sativa subsp. japonica DFL2, GH3-10 0.8658239414497236 65 Smo106498 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein LIL3:1 0.8657183299584493 66 Smo232430 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase PDS3, PDS, PDE226 0.86422367371629 67 Smo61985 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF107 transcript stability factor HCF107 0.8635953380877861 68 Smo93338 Solute transport.carrier-mediated transport.APC superfamily.HAAAP-type aromatic amino acid transporter 0.8614117618738311 69 Smo30996 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor 0.8612331603373463 70 Smo424099 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OTP84 0.8610488426634186 71 Smo228849 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CRB, HIP1.3, CSP41B 0.8610364390050889 72 Smo73428 Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit gamma ATPC1 0.8609479240115046 73 Smo413851 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst ATCYP38, CYP38 0.8607934182073241 74 Smo107842 Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. indica CPSAR1, EMB269, ATOBGC 0.8607746119272341 75 Smo98780 Monooxygenase 2 OS=Arabidopsis thaliana CTF2A 0.8594453935993885 76 Smo272235 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO OEC33, PSBO-2, PSBO2 0.8594321063666173 77 Smo437487 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase 0.859208290101701 78 Smo104804 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCq component 0.8583720934120773 79 Smo183274 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF173 protein HCF173 0.8580241399566639 80 Smo160384 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.8578019296479854 89 Smo11088 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana 0.8570975804814558 82 Smo79664 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8567724587570776 83 Smo445504 0.8566653893443559 84 Smo270155 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.TPT phosphometabolite transporter GPT1, ATGPT1 0.8563459623415758 85 Smo64109 0.8563269297144604 86 Smo166238 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein LPA3 0.8562187665120685 95 Smo85565 0.855503833310692 88 Smo230423 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component CHL I2, CHLI2, CHLI-2 0.8554610294348479 89 Smo176144 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP1, Deg1 0.8553657851216522 90 Smo270821 0.8547400866842442 91 Smo423983 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG CHLG, G4, ATG4 0.8545776277249062 92 Smo82221 Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana 0.854448640309673 93 Smo90782 Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana 0.854256796943802 94 Smo449377 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO OEC33, PSBO-2, PSBO2 0.8539084554509553 95 Smo170069 Coenzyme metabolism.phylloquinone synthesis.1,4-dihydroxy-2-naphthoyl-CoA synthase ECHID, DHNS 0.8536874426154659 96 Smo438825 0.8523115732401099 97 Smo230748 Carbohydrate metabolism.gluconeogenesis.pyruvate orthophosphate dikinase activity.pyruvate orthophosphate dikinase PPDK 0.8522204792350192 98 Smo82002 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF152 transcript stability factor CRM3, HCF152 0.8502594775070584 100