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  5. Smo110422

Smo110422 (OTP82)


Aliases : OTP82

Description : Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo110422
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00033910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49740... 0.02 OrthoFinder output from all 47 species
Adi_g003809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012952 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03970 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20987 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g26069 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g27165 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G059500.1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g05705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16528 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g14450.1 LOC_Os04g14450 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
Msp_g12985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19405 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g22507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48763 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10043 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g06265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06334 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1 21
No external refs found!