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  5. Smo110329

Smo110329


Description : 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo110329
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00101790 4CL3,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
Aob_g03284 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
MA_109119g0010 4CL3 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
Mp5g01200.1 4CL1, AT4CL1, 4CL.1 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
Pnu_g07993 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e037698_P001 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 463 538
No external refs found!