1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo104828

Smo104828


Description : Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC5 component


Gene families : OG0004795 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004795_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo104828
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00147450 evm_27.TU.AmTr_v1... Anaphase-promoting complex subunit 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G06590 No alias unknown protein; Has 380 Blast hits to 268 proteins in... 0.06 OrthoFinder output from all 47 species
Cre01.g034650 No alias No description available 0.03 OrthoFinder output from all 47 species
Dde_g20958 No alias component *(APC5) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Lfl_g08325 No alias component *(APC5) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Mp3g02010.1 No alias component APC5 of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Ore_g30303 No alias component *(APC5) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007532 No alias component *(APC5) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Tin_g02150 No alias component *(APC5) of (APC/C)-dependent ubiquiTination... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004529 exodeoxyribonuclease activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP HCCA
MF GO:0008409 5'-3' exonuclease activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR026000 Apc5_dom 243 331
No external refs found!