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Aliases : COL2, ATCOL2
Description : Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana
Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo102902 | |
| Cluster | HCCA: Cluster_50 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0006.g009656 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: CDS=186-1232 | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g09279 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g22951 | ATCOL4, COL4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g39710.1 | ATCOL5, COL5,... | transcription factor (BBX-CO) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g44450.1 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g06394 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013804_P001 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| MF | GO:0003993 | acid phosphatase activity | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010402 | CCT_domain | 24 | 66 |
| No external refs found! |