Smo102892

Description : Polygalacturonase OS=Chamaecyparis obtusa

Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo102892

Target	Alias	Description	ECC score	Gene Family Method
AT1G23460	No alias	Pectin lyase-like superfamily protein	0.02	OrthoFinder output from all 47 species
LOC_Os01g07790.1	QRT2, LOC_Os01g07790	Probable polygalacturonase At3g15720 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Ore_g42249	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g03112	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc10g080210.2.1	QRT2, Solyc10g080210	polygalacturonase (QRT2)	0.02	OrthoFinder output from all 47 species
Zm00001e017565_P001	Zm00001e017565	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0070403	NAD+ binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	59	212

External Links

No external refs found!