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  5. Smo101122

Smo101122 (GN, EMB30, VAN7)


Aliases : GN, EMB30, VAN7

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.GBF-type ARF-GEF factor


Gene families : OG0002212 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo101122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00208840 GNL2,... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
AT1G13980 GN, EMB30, VAN7 sec7 domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g011528 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
Adi_g020078 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.04 OrthoFinder output from all 47 species
Aob_g06750 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene65565.t1 GN, EMB30, VAN7,... ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Ceric.02G006600.1 GN, EMB30, VAN7,... ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Ceric.15G051500.1 GN, EMB30, VAN7,... ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Dde_g00978 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01013109001 GN, EMB30, VAN7 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
LOC_Os02g22090.1 GN, EMB30, VAN7,... GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g46330.1 GN, EMB30, VAN7,... GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
Len_g02430 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
MA_10434215g0010 GN, EMB30, VAN7 GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 OrthoFinder output from all 47 species
Mp3g25100.1 GN, EMB30, VAN7 GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0267.g026961 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Solyc05g013040.3.1 GN, EMB30, VAN7,... GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 OrthoFinder output from all 47 species
Spa_g26131 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.01 OrthoFinder output from all 47 species
Zm00001e002340_P001 GN, EMB30, VAN7,... GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR000904 Sec7_dom 530 713
No external refs found!