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  5. Smo100270

Smo100270


Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.TNPO3 transport karyopherin


Gene families : OG0004537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo100270

Target Alias Description ECC score Gene Family Method Actions
AT5G62600 No alias ARM repeat superfamily protein 0.07 OrthoFinder output from all 47 species
Aev_g24041 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.02 OrthoFinder output from all 47 species
Ala_g25081 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.03 OrthoFinder output from all 47 species
Als_g01133 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.05 OrthoFinder output from all 47 species
Azfi_s0030.g024383 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.03 OrthoFinder output from all 47 species
Cba_g11571 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.03 OrthoFinder output from all 47 species
Ceric.07G095100.1 Ceric.07G095100 nucleocytoplasmic transport karyopherin *(MOS14) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001027.19 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre02.g097250 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Dcu_g43936 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.04 OrthoFinder output from all 47 species
Lfl_g36168 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.07 OrthoFinder output from all 47 species
MA_10432458g0010 No alias Transportin MOS14 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_181638g0010 No alias TNPO3 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species
MA_87137g0010 No alias TNPO3 nucleocytoplasmic transport karyopherin 0.04 OrthoFinder output from all 47 species
Mp8g15200.1 No alias TNPO3 nucleocytoplasmic transport karyopherin 0.05 OrthoFinder output from all 47 species
Msp_g00702 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.02 OrthoFinder output from all 47 species
Ore_g20697 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.02 OrthoFinder output from all 47 species
Pp3c11_11570V3.1 Pp3c11_11570 ARM repeat superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g22253 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.05 OrthoFinder output from all 47 species
Zm00001e004571_P001 Zm00001e004571 TNPO3 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 26 92
No external refs found!