LOC_Os12g43340.1 (ADF6, ATADF6, LOC_Os12g43340)


Aliases : ADF6, ATADF6, LOC_Os12g43340

Description : actin-depolymerizing factor


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g43340.1

Target Alias Description ECC score Gene Family Method Actions
AT4G25590 ADF7 actin depolymerizing factor 7 0.03 OrthoFinder output from all 47 species
Adi_g004759 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g53563 ADF11 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57628 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59437 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00265 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31809 ADF8 actin-depolymerizing factor & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.04G031400.1 ATADF1, ADF1,... actin-depolymerizing factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g34893 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os03g60580.1 ADF3, LOC_Os03g60580 actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species
Lfl_g22002 ADF11 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27074 ADF11 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g111380.3.1 ADF5, ATADF5,... actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 20 142
No external refs found!