1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g43300.1

LOC_Os12g43300.1 (LOC_Os12g43300)


Aliases : LOC_Os12g43300

Description : no hits & (original description: none)


Gene families : OG0001704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001704_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g43300.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT1G78720 No alias SecY protein transport family protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019561 Translocon_Sec61/SecY_plug_dom 29 65
IPR002208 SecY/SEC61-alpha 68 329
No external refs found!