LOC_Os12g42600.1 (UBP8, LOC_Os12g42600)

Aliases : UBP8, LOC_Os12g42600

Description : deubiquitinase (UBP5|8-11)

Gene families : OG0001745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001745_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g42600.1

Target	Alias	Description	ECC score	Gene Family Method
Cre02.g117850	UBP11	Protein degradation.peptidase families.cysteine-type...	0.01	OrthoFinder output from all 47 species
GSVIVT01001899001	ATUBP5, UBP5, PDE323	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
Gb_11501	ATUBP5, UBP5, PDE323	deubiquitinase (UBP5\|8-11)	0.05	OrthoFinder output from all 47 species
Lfl_g02368	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: none	0.03	OrthoFinder output from all 47 species
MA_11753g0010	UBP9	deubiquitinase (UBP5\|8-11)	0.04	OrthoFinder output from all 47 species
MA_354557g0010	ATUBP5, UBP5, PDE323	deubiquitinase (UBP5\|8-11)	0.03	OrthoFinder output from all 47 species
Nbi_g10435	UBP10	deubiquitinase *(UBP5/8-11) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g11381	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g19443	No alias	deubiquitinase *(UBP5/8-11) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc09g019970.3.1	ATUBP5, UBP5,...	deubiquitinase (UBP5\|8-11)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	272	777

External Links

No external refs found!