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  5. LOC_Os12g41700.1

LOC_Os12g41700.1 (LSD1, LOC_Os12g41700)


Aliases : LSD1, LOC_Os12g41700

Description : LSD/LOL programmed cell death regulator protein


Gene families : OG0001748 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001748_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g41700.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Als_g09430 LSD1 regulatory protein *(LSD/LOL) of programmed cell death &... 0.02 OrthoFinder output from all 47 species
Azfi_s0749.g085079 LSD1 regulatory protein *(LSD/LOL) of programmed cell death &... 0.04 OrthoFinder output from all 47 species
Zm00001e005043_P002 LSD1, Zm00001e005043 LSD/LOL programmed cell death regulator protein 0.02 OrthoFinder output from all 47 species
Zm00001e018104_P003 LSD1, Zm00001e018104 LSD/LOL programmed cell death regulator protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 47 71
IPR005735 Znf_LSD1 85 109
IPR005735 Znf_LSD1 7 31
No external refs found!