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  5. LOC_Os12g41600.1

LOC_Os12g41600.1 (LOC_Os12g41600)


Aliases : LOC_Os12g41600

Description : no hits & (original description: none)


Gene families : OG0004174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g41600.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00021630 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G17345 No alias SAUR-like auxin-responsive protein family 0.04 OrthoFinder output from all 47 species
AT1G72430 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT3G12955 No alias SAUR-like auxin-responsive protein family 0.04 OrthoFinder output from all 47 species
AT5G20820 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
Aop_g02396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37828.t1 Aspi01Gene37828 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.22G048400.1 Ceric.22G048400 not classified & original description: pacid=50613756... 0.03 OrthoFinder output from all 47 species
Gb_39586 No alias no description available(sp|q9lqi6|sau77_arath : 82.4) 0.04 OrthoFinder output from all 47 species
LOC_Os08g35110.1 LOC_Os08g35110 no description available(sp|q29pu2|sau76_arath : 85.5) 0.05 OrthoFinder output from all 47 species
Len_g06344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_18725g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_245557g0010 No alias no description available(sp|q29pu2|sau76_arath : 81.6) 0.03 OrthoFinder output from all 47 species
MA_372975g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_536667g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g025985.1.1 Solyc05g025985 no description available(sp|q29pu2|sau76_arath : 90.9) 0.05 OrthoFinder output from all 47 species
Solyc12g009290.1.1 Solyc12g009290 no description available(sp|q29pu2|sau76_arath : 103.0) 0.07 OrthoFinder output from all 47 species
Tin_g16469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004043_P001 Zm00001e004043 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e004044_P001 Zm00001e004044 no description available(sp|q29pu2|sau76_arath : 80.9) 0.04 OrthoFinder output from all 47 species
Zm00001e004047_P001 Zm00001e004047 no description available(sp|q29pu2|sau76_arath : 84.3) 0.05 OrthoFinder output from all 47 species
Zm00001e018093_P001 Zm00001e018093 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e022194_P001 Zm00001e022194 no description available(sp|q29pu2|sau76_arath : 103.0) 0.04 OrthoFinder output from all 47 species
Zm00001e034247_P001 Zm00001e034247 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!