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  5. LOC_Os12g39090.2

LOC_Os12g39090.2 (LOC_Os12g39090)


Aliases : LOC_Os12g39090

Description : component ADA1 of SAGA transcription co-activator complex


Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os12g39090.2

Target Alias Description ECC score Gene Family Method Actions
Ala_g02361 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Dac_g03362 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Dcu_g22539 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
LOC_Os04g56300.1 LOC_Os04g56300 component ADA1 of SAGA transcription co-activator complex 0.05 OrthoFinder output from all 47 species
Pir_g11294 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Pnu_g08174 No alias component *(ADA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Solyc03g117820.1.1 Solyc03g117820 component ADA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Solyc06g068610.3.1 Solyc06g068610 component ADA1 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 10 267
No external refs found!