LOC_Os12g38110.1 (LOC_Os12g38110)

Aliases : LOC_Os12g38110

Description : IMB1 nucleocytoplasmic import karyopherin

Gene families : OG0001300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001300_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g38110.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00157820	evm_27.TU.AmTr_v1...	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
AMTR_s00058p00188470	evm_27.TU.AmTr_v1...	Protein translocation.nucleus.nucleocytoplasmic...	0.04	OrthoFinder output from all 47 species
Adi_g102316	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species
Adi_g102317	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species
Ala_g09011	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Als_g27083	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Aop_g04439	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene61581.t1	Aspi01Gene61581	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0062.g035201	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species
Cba_g02724	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Ceric.33G016000.1	Ceric.33G016000	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021348.90	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
Cre01.g034000	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.02	OrthoFinder output from all 47 species
Dac_g01769	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g04978	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01038575001	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.04	OrthoFinder output from all 47 species
Gb_35028	No alias	IMB1 nucleocytoplasmic import karyopherin	0.03	OrthoFinder output from all 47 species
LOC_Os05g28510.4	LOC_Os05g28510	IMB1 nucleocytoplasmic import karyopherin	0.02	OrthoFinder output from all 47 species
MA_12771g0010	No alias	IMB1 nucleocytoplasmic import karyopherin	0.04	OrthoFinder output from all 47 species
Mp6g11310.1	No alias	IMB1 nucleocytoplasmic import karyopherin	0.03	OrthoFinder output from all 47 species
Pir_g15801	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Ppi_g02369	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species
Spa_g12818	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e002934_P001	Zm00001e002934	IMB1 nucleocytoplasmic import karyopherin	0.07	OrthoFinder output from all 47 species
Zm00001e018172_P001	Zm00001e018172	IMB1 nucleocytoplasmic import karyopherin	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006606	protein import into nucleus	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034504	protein localization to nucleus	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051170	import into nucleus	IEP	HCCA
MF	GO:0061608	nuclear import signal receptor activity	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001494	Importin-beta_N	23	102

External Links

No external refs found!

LOC_Os12g38110.1 (LOC_Os12g38110)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation