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  5. LOC_Os12g36920.1

LOC_Os12g36920.1 (LOC_Os12g36920)


Aliases : LOC_Os12g36920

Description : Calmodulin-binding protein 60 D OS=Arabidopsis thaliana (sp|q0wvv6|cb60d_arath : 177.0)


Gene families : OG0000494 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000494_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g36920.1

Target Alias Description ECC score Gene Family Method Actions
AT1G73805 No alias Calmodulin binding protein-like 0.04 OrthoFinder output from all 47 species
AT5G26920 CBP60G Cam-binding protein 60-like G 0.05 OrthoFinder output from all 47 species
Adi_g053429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20189 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Aop_g13430 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Aop_g69471 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Ceric.31G029800.1 Ceric.31G029800 regulatory protein *(CBP60) of systemic acquired... 0.05 OrthoFinder output from all 47 species
Dde_g02342 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Dde_g38611 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
GSVIVT01003722001 No alias Calmodulin-binding protein 60 E OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01008322001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01008323001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01008324001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_39213 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g44170.1 LOC_Os11g44170 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g44600.1 LOC_Os11g44600 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g44680.1 LOC_Os11g44680 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g44700.1 LOC_Os11g44700 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g36940.1 LOC_Os12g36940 Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g11890 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
MA_18754g0010 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_23963g0010 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g13955 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Sam_g39358 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Smo166784 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g113940.4.1 Solyc03g113940 Calmodulin-binding protein 60 A OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc03g113950.4.1 Solyc03g113950 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g113960.4.1 CBP60G, Solyc03g113960 Calmodulin-binding protein 60 A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g119250.4.1 Solyc03g119250 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g036390.2.1 Solyc12g036390 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g12198 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Zm00001e001388_P002 Zm00001e001388 Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e004278_P001 Zm00001e004278 Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e016998_P001 Zm00001e016998 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e038367_P001 Zm00001e038367 Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e039693_P002 Zm00001e039693 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR012416 CBP60 147 437
No external refs found!