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  5. LOC_Os12g09890.1

LOC_Os12g09890.1 (LOC_Os12g09890)


Aliases : LOC_Os12g09890

Description : no hits & (original description: none)


Gene families : OG0003407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003407_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g09890.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g22140.1 LOC_Os01g22140 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g24890.1 LOC_Os01g24890 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g29850.1 LOC_Os01g29850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g33609.1 LOC_Os01g33609 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g14550.1 LOC_Os02g14550 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g19240.1 LOC_Os02g19240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g21720.1 LOC_Os02g21720 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g30390.1 LOC_Os02g30390 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g36090.1 LOC_Os02g36090 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g45810.1 LOC_Os03g45810 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g03610.1 LOC_Os04g03610 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g24680.1 LOC_Os04g24680 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g14410.1 LOC_Os05g14410 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g25170.1 LOC_Os05g25170 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os06g15010.1 LOC_Os06g15010 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g19510.1 LOC_Os06g19510 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os07g05330.1 LOC_Os07g05330 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g15310.1 LOC_Os08g15310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g16340.1 LOC_Os08g16340 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os08g17730.1 LOC_Os08g17730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g17740.1 LOC_Os08g17740 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g24290.1 LOC_Os08g24290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g28760.1 LOC_Os08g28760 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os09g01750.1 LOC_Os09g01750 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g14770.1 LOC_Os09g14770 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os10g20980.1 LOC_Os10g20980 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g15430.1 LOC_Os11g15430 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g16630.1 LOC_Os11g16630 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g25630.1 LOC_Os11g25630 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g15950.1 LOC_Os12g15950 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g25020.1 LOC_Os12g25020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g29630.1 LOC_Os12g29630 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR004252 Probable_transposase_24 243 383
No external refs found!