Heatmap: Cluster_126 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g38750.1 (LOC_Os01g38750)
-2.72 2.7 - -1.69 4.7 3.98 - -2.56 - - -2.24 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os01g60510.1 (LOC_Os01g60510)
- 3.84 - 3.45 3.93 2.75 -0.66 -0.65 - - - - - - - - - - - - - -0.85 - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os02g05590.1 (LOC_Os02g05590)
- 4.88 - - 3.92 - - - - - - - - - - - - - - - 0.19 0.24 - - - - - - - - - - - - - - - - - - - 1.09 - - - - - - -
LOC_Os02g13250.1 (LOC_Os02g13250)
- 3.63 - -1.95 4.03 2.56 - -3.08 - - -5.55 -0.82 - - - - - -2.51 - -2.45 -1.48 - -3.31 -1.63 - - - - - - - 2.41 - - - - 0.26 1.42 - -1.41 -3.28 0.38 -2.63 - 0.17 - - - -
LOC_Os02g22710.1 (LOC_Os02g22710)
0.71 3.35 1.42 1.61 4.29 1.05 - -2.11 -2.08 - - - - 3.15 - - -1.3 -5.79 - - - - - -3.71 - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os02g30590.1 (LOC_Os02g30590)
0.1 2.45 -0.16 1.34 4.06 1.04 -0.4 -0.55 -0.15 -1.65 -0.6 -1.02 - 1.6 - - 1.58 -1.23 - -1.96 - - -4.51 -2.8 1.83 0.19 - - - - - - - - - - -0.49 - - -3.73 -1.98 -0.78 -2.97 1.11 -1.02 -1.13 - - -
LOC_Os02g48020.1 (LOC_Os02g48020)
-0.19 2.13 - - 5.31 2.03 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os03g11150.1 (LOC_Os03g11150)
1.32 2.67 - 1.49 4.76 3.13 - - - - -1.14 -1.2 - - - - - -2.54 - - -2.51 - - - - - - - - - - - - - - - - - - - - -1.84 - - - - - - -
LOC_Os03g24010.1 (LOC_Os03g24010)
-4.06 3.17 - -2.27 5.04 0.15 - -1.7 -2.03 - -3.48 - - -0.59 0.9 - - -6.01 - - - -4.12 - - - -0.21 - - - - - 0.61 - - - - - - - - - - -2.78 - - - - - -
LOC_Os03g25000.1 (LOC_Os03g25000)
-0.99 3.97 - -0.41 4.4 2.68 1.27 - -0.12 - - - - - - - - - - -5.38 - - - - - - - - - - - -0.3 - - - - - - - -2.18 - - - -2.68 - - - - -
LOC_Os04g26170.1 (LOC_Os04g26170)
-2.6 3.52 - 2.92 4.25 1.18 1.04 1.39 -1.81 - -4.13 - - - - - - - - -4.65 -4.11 -4.48 -5.48 -1.03 -0.47 - - - - - - 1.01 - - - - - - - - -3.56 -4.41 - - - - - - -
LOC_Os04g26460.1 (LOC_Os04g26460)
- 2.89 - - 5.06 1.31 1.78 - - - - - - - - - - - - - - -0.29 -1.46 - - - - - - - - 0.21 - - - - - - - - - - - - - - - - -
LOC_Os04g29440.1 (LOC_Os04g29440)
0.11 3.06 -0.59 - 3.64 2.88 2.19 2.14 1.12 - -2.07 0.25 - - - - -5.86 - - -2.99 -1.33 - -1.75 -0.37 - -0.21 - - - -0.21 - 0.11 - - - - - -0.05 - - -2.44 -1.32 -1.3 -3.21 - - - - -
LOC_Os05g10300.1 (LOC_Os05g10300)
- 3.73 - 0.18 4.55 1.1 - -0.5 - 1.26 -0.55 - 0.8 1.33 - - - -2.67 - -4.23 - - - -2.15 - - - - - - - - - - - - - - - - - - - -0.96 - - - - -
LOC_Os05g41960.1 (LOC_Os05g41960)
1.07 3.32 -0.55 2.41 3.74 2.62 -1.34 -0.59 -2.29 -6.57 -2.68 - 0.02 -2.13 - - 0.86 -2.74 0.73 -0.42 -4.9 -6.98 - - -0.66 - - - - - - -3.03 - - - - - -3.35 - -4.3 -7.05 -4.13 -2.7 0.74 -1.09 -0.09 - - -2.93
LOC_Os05g43900.1 (LOC_Os05g43900)
2.04 4.4 - - 4.57 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os05g52080.1 (LOC_Os05g52080)
-0.43 2.18 -2.33 1.14 4.31 2.29 1.19 2.26 - - -6.15 - -1.06 2.35 - - -2.79 -3.35 - -6.75 -4.07 - -4.85 -2.75 - -1.59 - - -1.55 - - -2.41 -1.45 - -1.16 - -1.58 - - - -2.64 -4.0 -3.91 -2.02 - - -0.13 - -
LOC_Os06g20830.1 (LOC_Os06g20830)
-4.12 2.75 - -0.19 3.89 3.11 -0.52 0.71 - - - - - 0.51 1.86 1.87 - -2.06 - -2.06 - -3.17 - -2.8 - 0.6 0.58 - - - - -1.22 - - - - - - - - - - - -3.59 1.38 - - - -
LOC_Os06g22530.1 (LOC_Os06g22530)
-0.61 3.54 - 1.53 4.54 1.16 1.82 1.83 0.07 - -3.24 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os06g35080.1 (LOC_Os06g35080)
0.31 3.6 -0.04 0.9 4.09 - -0.59 2.72 1.34 - - - - 1.25 - - - - - - - - - -1.6 - - - - - - - 1.71 - - - - - - - - - - - - - - - - -
LOC_Os06g35300.1 (LOC_Os06g35300)
-4.95 3.12 - 1.2 4.64 0.83 1.63 2.51 - - -4.55 - - - - - - - - - - - - - 1.31 - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os06g38520.1 (LOC_Os06g38520)
-3.25 2.15 -0.9 1.35 5.22 0.98 -0.54 0.23 - - - - - - - - - - - - - - - -4.24 - - - - - - - -2.93 - - - - - - - - - - - - - - - - -
LOC_Os06g47050.1 (LOC_Os06g47050)
1.41 3.12 -0.21 - 4.74 - 2.7 - 0.79 - - - - - - - - - - - - - - - - - - - - - - 0.79 - - - - - - - - - - - - - - - - -
LOC_Os07g10340.1 (LOC_Os07g10340)
- 2.44 - 3.04 4.87 2.35 -0.16 - - - -3.57 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.25 2.9 0.24 0.69 4.5 2.55 - - 1.7 - -1.36 - - - - - - - - -2.41 -1.71 -2.92 -2.33 -2.07 - 1.4 - - - - - -0.43 - - - - 0.4 - - -3.25 - - - - - - - - -
LOC_Os07g40060.1 (LOC_Os07g40060)
0.2 3.76 - -1.63 4.6 - - - -1.3 - -3.41 - - -0.22 - - - -2.41 - -6.39 - -1.7 - -1.76 - - - - - 0.5 - -0.81 - - - - 0.63 - - - -2.69 -2.12 - -2.74 -0.11 - - - 1.33
LOC_Os07g40070.1 (LOC_Os07g40070)
- 2.73 - - 4.93 - - - 1.36 -1.23 -1.51 0.62 - - - - - - - - -1.58 - - - - - - - - - - 0.32 - - - - 2.35 - - -1.24 - - - - - - - - -
-3.03 3.08 - - 4.13 3.01 -1.39 -3.44 2.63 - -2.28 - -2.08 -0.88 - - -1.83 -0.79 - -2.6 -5.5 - - - - -1.32 -1.39 - - - - - - - - - - - - - -4.89 - -3.93 -3.77 - - 1.95 0.38 -
LOC_Os08g22034.1 (LOC_Os08g22034)
- 1.96 - - 5.26 - 0.76 - 2.38 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os08g25600.1 (LOC_Os08g25600)
-1.12 3.02 - 2.11 4.8 2.28 - - 0.68 - - - - - - - -0.65 - - - - - - - - - - - - - - -0.17 - - - - - - - -1.94 - - - - - - - - -
LOC_Os08g33030.1 (LOC_Os08g33030)
0.09 2.26 -1.23 2.22 4.59 1.36 0.74 0.27 -2.5 -1.89 -2.79 -1.75 -2.16 -0.16 0.49 - -1.76 -2.04 - -2.03 -3.39 -3.28 -6.07 -3.75 - -2.51 -0.1 - -1.65 -1.98 - - - - - -2.21 -1.31 -2.45 - -3.15 -2.94 -4.16 -2.23 -1.97 - -0.69 - - -2.03
LOC_Os09g21310.1 (LOC_Os09g21310)
-0.71 3.08 - 0.62 3.9 1.41 -2.81 -0.57 - - -0.25 - -0.51 1.84 - - -1.67 -1.15 - -0.69 -1.72 -3.37 -4.04 - - 1.15 -0.74 - - 1.7 - -0.29 - - - - 0.53 - - -2.62 -2.27 -0.36 -1.8 -2.07 - -1.22 0.77 -0.14 -
LOC_Os09g22050.1 (LOC_Os09g22050)
-5.46 2.49 - 0.74 5.04 1.0 0.33 - - - -5.25 - - - - - -4.23 -1.04 - -0.73 - - - -3.94 - -1.19 0.29 - - - - -2.89 - - - -0.0 - - - -4.73 -3.68 - - 0.47 - - - - -
LOC_Os09g36380.1 (LOC_Os09g36380)
-0.15 0.93 - 0.87 4.68 3.39 -0.14 -3.01 2.75 - -3.72 -1.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -3.04 - - - - -
LOC_Os09g37090.1 (LOC_Os09g37090)
- 1.7 - 1.13 5.35 1.08 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.36 - - - - - - -
LOC_Os10g10140.1 (LOC_Os10g10140)
0.68 3.24 -0.93 -1.42 4.87 1.02 - -2.58 -0.9 - -5.04 -0.82 - -0.38 - - - - - -3.07 -2.13 - - -1.01 - - - - - - - -0.28 - - - - - - - - - - - 0.07 - -0.0 - - -
LOC_Os10g10320.1 (LOC_Os10g10320)
-1.02 4.18 -1.42 - 4.22 3.39 - - -0.12 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os10g10664.1 (LOC_Os10g10664)
0.63 2.51 -3.42 2.38 4.22 2.5 0.01 0.57 -1.11 -4.18 -3.14 - -3.34 -0.05 - - -5.7 -2.51 0.96 -1.75 - -5.18 - -5.5 0.49 -1.49 - - - -3.95 -3.86 -2.83 - - - - - - - - -4.66 -4.47 - -1.9 1.0 0.05 - - -
LOC_Os10g11770.1 (LOC_Os10g11770)
-3.1 2.23 - 2.28 4.78 - -2.37 -1.37 - -2.61 -1.86 - - 3.4 - - - - - -1.77 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os10g16690.1 (LOC_Os10g16690)
-4.13 3.52 -1.4 1.95 3.4 2.03 - -0.53 1.01 - -2.77 0.27 0.52 2.75 - - -1.56 -3.6 - -0.58 -3.75 -4.23 -2.96 -1.53 - -0.64 -0.7 - - - - -0.14 - - - - - - - -3.87 - -2.48 -2.04 -1.29 -0.75 0.01 - - -
LOC_Os10g24180.1 (LOC_Os10g24180)
-0.0 2.39 -2.88 2.73 3.93 3.46 -0.06 -0.02 -1.22 -4.46 -2.04 - -1.35 -0.06 - - -2.39 -0.01 - -2.2 -3.6 - - -5.14 - -0.53 - -1.05 - - - -2.55 - - - -0.28 - - - - - - -2.62 -1.41 - - - -1.76 0.19
LOC_Os10g26480.1 (LOC_Os10g26480)
-3.29 3.12 -2.48 2.32 5.07 -0.08 - - - - - - - -0.85 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os10g36320.1 (CYP94D1)
-3.18 3.79 -0.6 0.93 4.94 - - - - - -1.8 - - - - - -1.66 -2.52 - - - - - - - - - - - - - - - - - - - - - - - -0.49 - -1.52 - - - - -
LOC_Os10g36740.1 (CYP89A5)
-1.33 1.53 -3.5 -0.17 4.03 -1.22 -1.3 -1.12 -1.03 -5.97 -0.67 -4.12 2.01 2.35 -0.4 0.25 -1.35 -1.08 - -0.17 -1.51 -3.88 -1.63 -4.17 0.35 0.4 -1.69 -0.93 -1.94 - - -4.43 -0.75 - -2.44 -0.94 -2.4 -2.74 -1.69 -4.79 -2.25 -3.5 -4.31 -0.02 1.87 0.51 -2.63 - -
LOC_Os10g40160.1 (LOC_Os10g40160)
- 3.73 -2.06 2.75 4.33 1.6 -0.7 -2.63 - -9.17 -3.95 - -0.6 1.52 - - -25.63 -4.87 - -3.41 - - -4.65 -2.21 - - - - - - - - - - - - - - - - -20.61 - -0.64 -2.1 - - - - -
- 4.4 -1.9 - 3.85 - - - 2.84 - -4.43 - - - - - - - - - - - - -0.05 - - - - - - - 1.52 - - 1.19 - - - - - - - - - - - - - -
LOC_Os11g17620.1 (LOC_Os11g17620)
- 3.41 - 3.2 4.5 - - - - - -4.83 - - 2.6 - - - - - -2.09 - - - - - - - - - - - - - - - - - - - - - - - -2.07 - - - - -
LOC_Os11g32600.1 (LOC_Os11g32600)
0.46 3.26 -0.71 - 4.84 1.02 - - - - -10.26 -5.57 - - - - - - - -0.88 - -1.71 - 0.08 - - - - - - - -0.11 - - - - - - - 0.55 0.85 -11.08 -0.94 - - - - - -
LOC_Os11g35370.1 (LOC_Os11g35370)
-2.8 1.26 -1.51 -0.59 4.79 0.88 - - - - - 1.28 - - - - - -3.04 - 0.13 -3.31 -3.54 - -3.59 - 0.03 - - - - - -1.48 - - 1.52 - - - - -0.12 -0.04 1.31 0.5 -2.85 0.01 - - -0.2 -
LOC_Os12g08300.1 (LOC_Os12g08300)
-1.34 3.25 -3.05 1.58 4.29 -1.23 1.89 2.5 -2.64 -4.28 -3.87 -1.68 - -0.84 - - - 1.35 - -1.8 -3.07 -4.73 0.11 - - - - - - - - - - - - - -0.71 - - - - -3.58 - - -1.44 -1.89 - - -
LOC_Os12g09460.1 (LOC_Os12g09460)
-3.35 2.35 1.2 1.95 5.13 - 1.08 - - - -7.02 - - - - - -1.82 -2.16 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os12g09890.1 (LOC_Os12g09890)
-3.78 3.28 -0.52 2.03 4.44 2.49 -2.54 -1.53 0.15 - - -0.09 - - - - - -1.89 - - -2.83 - -4.99 -1.16 - -0.55 -3.9 - - - - 0.66 - - - - - - - - - - - - 0.35 - - - -
LOC_Os12g14860.1 (LOC_Os12g14860)
0.09 3.0 -0.58 0.92 3.42 2.07 -2.31 -2.23 -1.56 -1.48 -1.13 -2.05 -0.9 2.79 - - -2.68 -0.9 - -0.59 -0.95 0.52 -1.17 -2.2 - -0.25 -0.91 -1.6 -0.43 -2.48 -0.9 -0.8 -0.57 -2.2 -1.39 -0.71 -2.6 -2.95 -1.9 -2.82 -2.45 -3.59 -3.04 -0.2 -1.56 -0.64 -2.83 - -0.94
LOC_Os12g19910.1 (LOC_Os12g19910)
-3.15 3.37 -0.7 - 4.18 2.55 - - - -3.25 -3.13 -0.54 - -0.98 - - -3.36 - - - -1.4 -0.19 -1.79 1.25 - 0.0 - - - - - 1.01 - - - - - 0.81 1.55 -2.92 -2.53 - -0.9 - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.