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  5. LOC_Os12g09460.1

LOC_Os12g09460.1 (LOC_Os12g09460)


Aliases : LOC_Os12g09460

Description : no hits & (original description: none)


Gene families : OG0000013 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g09460.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00124700 evm_27.TU.AmTr_v1... Peroxidase 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00198480 evm_27.TU.AmTr_v1... Peroxidase N1 OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00030990 evm_27.TU.AmTr_v1... Peroxidase 65 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g29632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18808 PA2, ATPA2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22741.t1 PA2, ATPA2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018865001 No alias Peroxidase 72 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01031312001 RCI3, RCI3A Peroxidase 5 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
LOC_Os04g42100.1 LOC_Os04g42100 Peroxidase 18 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ppi_g09442 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g101050.3.1 Solyc01g101050 Peroxidase 5 OS=Vitis vinifera (sp|a7qeu4|per5_vitvi : 342.0) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA Interproscan
BP GO:0006979 response to oxidative stress IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
InterPro domains Description Start Stop
IPR002016 Haem_peroxidase 42 87
No external refs found!