LOC_Os12g08720.1 (LOC_Os12g08720)


Aliases : LOC_Os12g08720

Description : BTB/POZ domain-containing protein At2g13690 OS=Arabidopsis thaliana (sp|q9skh2|y2369_arath : 304.0)


Gene families : OG0001445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001445_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g08720.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00166010 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At3g50780... 0.03 OrthoFinder output from all 47 species
AT3G50780 No alias BEST Arabidopsis thaliana protein match is: BTB/POZ... 0.04 OrthoFinder output from all 47 species
Adi_g109099 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g02483 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ala_g16622 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ala_g20799 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g16155 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g24857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06194 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54771.t1 Aspi01Gene54771 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene61026.t1 Aspi01Gene61026 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0447.g070683 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cba_g16694 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cba_g78936 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ceric.14G021600.1 Ceric.14G021600 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.25G047400.1 Ceric.25G047400 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ceric.32G058100.1 Ceric.32G058100 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.37G060600.1 Ceric.37G060600 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Dac_g05132 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Dac_g12484 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g34094 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ehy_g07619 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ehy_g20804 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Gb_12306 No alias BTB/POZ domain-containing protein At1g63850... 0.02 OrthoFinder output from all 47 species
LOC_Os04g49060.1 LOC_Os04g49060 BTB/POZ domain-containing protein At1g63850... 0.05 OrthoFinder output from all 47 species
LOC_Os07g03150.3 LOC_Os07g03150 BTB/POZ domain-containing protein At3g50780... 0.03 OrthoFinder output from all 47 species
LOC_Os12g40480.1 LOC_Os12g40480 BTB/POZ domain-containing protein At3g50780... 0.04 OrthoFinder output from all 47 species
Len_g02880 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Lfl_g19920 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
MA_10228148g0010 No alias BTB/POZ domain-containing protein At1g63850... 0.03 OrthoFinder output from all 47 species
MA_10431611g0010 No alias BTB/POZ domain-containing protein At1g63850... 0.02 OrthoFinder output from all 47 species
MA_17820g0010 No alias BTB/POZ domain-containing protein At1g63850... 0.03 OrthoFinder output from all 47 species
Msp_g16592 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Msp_g48098 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ore_g17888 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g28552 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g12929 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g30790 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010860 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g09694 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g13729 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Solyc02g089950.2.1 Solyc02g089950 BTB/POZ domain-containing protein At3g50780... 0.03 OrthoFinder output from all 47 species
Spa_g04582 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Spa_g10858 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Spa_g12525 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Spa_g18240 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Tin_g02070 No alias substrate adaptor of CUL3-based E3 ubiquiTin ligase... 0.04 OrthoFinder output from all 47 species
Tin_g10530 No alias substrate adaptor of CUL3-based E3 ubiquiTin ligase... 0.04 OrthoFinder output from all 47 species
Zm00001e011544_P001 Zm00001e011544 BTB/POZ domain-containing protein At3g50780... 0.05 OrthoFinder output from all 47 species
Zm00001e033246_P001 Zm00001e033246 BTB/POZ domain-containing protein At2g13690... 0.02 OrthoFinder output from all 47 species
Zm00001e041407_P001 Zm00001e041407 BTB/POZ domain-containing protein At1g63850... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!