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  5. LOC_Os12g07480.1

LOC_Os12g07480.1 (LOC_Os12g07480)


Aliases : LOC_Os12g07480

Description : transcription factor (TCP)


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g07480.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00035550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
AT1G69690 No alias TCP family transcription factor 0.06 OrthoFinder output from all 47 species
AT2G45680 No alias TCP family transcription factor 0.02 OrthoFinder output from all 47 species
AT3G27010 AT-TCP20, TCP20,... TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family... 0.02 OrthoFinder output from all 47 species
AT5G23280 No alias TCP family transcription factor 0.04 OrthoFinder output from all 47 species
Adi_g010474 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058016 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059260 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069116 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115586 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06733 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22495 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07427 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46523 AT-TCP20, TCP20,... circadian clock activation factor *(TCP20) & original... 0.02 OrthoFinder output from all 47 species
Als_g55010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43392.t1 Aspi01Gene43392 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010337 AtTCP14, TCP14 TCP-type transcription factor & original description: CDS=1-2394 0.03 OrthoFinder output from all 47 species
Cba_g15454 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G017100.1 Ceric.02G017100 TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g06407 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01691 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26686 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008023001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01020011001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.06 OrthoFinder output from all 47 species
GSVIVT01023283001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
LOC_Os02g42380.1 LOC_Os02g42380 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os11g07460.1 LOC_Os11g07460 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Len_g58006 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15294 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_16752g0010 No alias transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_635g0010 AtTCP14, TCP14 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_81710g0010 No alias transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Mp7g09490.1 No alias transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Nbi_g05851 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00471 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50317 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06948 AT-TCP20, TCP20,... circadian clock activation factor *(TCP20) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017047 No alias TCP-type transcription factor & original description: CDS=1-1221 0.02 OrthoFinder output from all 47 species
Solyc01g103780.4.1 Solyc01g103780 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc03g006800.1.1 Solyc03g006800 transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
Solyc03g116320.3.1 AtTCP14, TCP14,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc04g009180.3.1 Solyc04g009180 transcription factor (TCP). CHE circadian clock repression factor 0.04 OrthoFinder output from all 47 species
Solyc09g008030.1.1 Solyc09g008030 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc11g020670.1.1 Solyc11g020670 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Spa_g50970 No alias TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e003744_P001 Zm00001e003744 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e023066_P001 Zm00001e023066 transcription factor (TCP). CHE circadian clock repression factor 0.03 OrthoFinder output from all 47 species
Zm00001e036117_P001 AtTCP14, TCP14,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 109 220
No external refs found!