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  5. LOC_Os12g05020.1

LOC_Os12g05020.1 (LOC_Os12g05020)


Aliases : LOC_Os12g05020

Description : no hits & (original description: none)


Gene families : OG0001384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g05020.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00182710 evm_27.TU.AmTr_v1... Jacalin-related lectin 19 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00036p00183970 evm_27.TU.AmTr_v1... Jacalin-related lectin 19 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G52030 MBP1.2, F-ATMBP, MBP2 myrosinase-binding protein 2 0.03 OrthoFinder output from all 47 species
AT3G16420 PBP1, JAL30 PYK10-binding protein 1 0.02 OrthoFinder output from all 47 species
AT3G16470 JR1 Mannose-binding lectin superfamily protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene66667.t1 Aspi01Gene66667 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g25160.1 LOC_Os01g25160 Salt stress-induced protein OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Nbi_g29542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g083040.1.1 MLP-300B, MEE36,... Inactive protein RESTRICTED TEV MOVEMENT 1... 0.03 OrthoFinder output from all 47 species
Solyc09g090445.1.1 Solyc09g090445 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e029549_P002 Zm00001e029549 Salt stress-induced protein OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 38 123
No external refs found!