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  5. LOC_Os12g03100.1

LOC_Os12g03100.1 (LOC_Os12g03100)


Aliases : LOC_Os12g03100

Description : Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana (sp|q6dbg8|arad1_arath : 253.0)


Gene families : OG0000774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000774_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g03100.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00076450 evm_27.TU.AmTr_v1... Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Als_g26686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40088 ARAD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21572 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.02 OrthoFinder output from all 47 species
MA_104022g0010 No alias Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012274 EDA5 not classified & original description: CDS=1-1467 0.02 OrthoFinder output from all 47 species
Zm00001e035279_P001 ARAD1, Zm00001e035279 1,5-alpha-arabinosyltransferase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 94 406
No external refs found!