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  5. LOC_Os12g02370.2

LOC_Os12g02370.2 (LOC_Os12g02370)


Aliases : LOC_Os12g02370

Description : Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana (sp|q8vzw3|cfi3_arath : 230.0)


Gene families : OG0002319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g02370.2
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00075600 evm_27.TU.AmTr_v1... Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G53520 No alias Chalcone-flavanone isomerase family protein 0.03 OrthoFinder output from all 47 species
Adi_g010980 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23437 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07581 No alias chalcone isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37318 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G016600.1 Ceric.09G016600 chalcone isomerase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g11451 No alias chalcone isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49503 No alias chalcone isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02028 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032685001 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g01030 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10237 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g30159 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
MA_502949g0010 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp5g01410.1 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g25257 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g31384 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11170 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_25770V3.1 Pp3c4_25770 Chalcone-flavanone isomerase family protein 0.02 OrthoFinder output from all 47 species
Ppi_g38923 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Smo227414 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc05g052240.3.1 Solyc05g052240 Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g10892 No alias chalcone isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020880_P001 Zm00001e020880 Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016087 Chalcone_isomerase 7 205
No external refs found!