LOC_Os12g02040.1 (LOC_Os12g02040)


Aliases : LOC_Os12g02040

Description : no hits & (original description: none)


Gene families : OG0003648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003648_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g02040.1

Target Alias Description ECC score Gene Family Method Actions
Aop_g27891 No alias component *(Cox-X1) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Ceric.22G027600.1 Ceric.22G027600 not classified & original description: pacid=50614998... 0.04 OrthoFinder output from all 47 species
GSVIVT01031131001 No alias No description available 0.09 OrthoFinder output from all 47 species
GSVIVT01032718001 No alias No description available 0.11 OrthoFinder output from all 47 species
LOC_Os02g37930.1 LOC_Os02g37930 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g07483 No alias component *(Cox-X1) of cytochrome c oxidase complex &... 0.02 OrthoFinder output from all 47 species
Smo409480 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g066720.3.1 Solyc01g066720 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc06g050870.3.1 Solyc06g050870 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e010957_P001 Zm00001e010957 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e014985_P001 Zm00001e014985 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e023960_P001 Zm00001e023960 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Zm00001e030559_P001 Zm00001e030559 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e036880_P001 Zm00001e036880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR007667 Hypoxia_induced_domain 14 60
No external refs found!