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  5. LOC_Os12g01140.1

LOC_Os12g01140.1 (RPT1, PHOT1, NPH1,...)


Aliases : RPT1, PHOT1, NPH1, JK224, LOC_Os12g01140

Description : protein kinase (AGC-VIII). phototropin light receptor. phototropin photoreceptor


Gene families : OG0001978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g01140.1

Target Alias Description ECC score Gene Family Method Actions
Cba_g16281 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000622.16 NPL1, PHOT2 Phototropin-2 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
GSVIVT01023842001 NPL1, PHOT2 External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
Pnu_g06501 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ppi_g32597 RPT1, PHOT1, NPH1, JK224 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e020806_P002 RPT1, PHOT1,... protein kinase (AGC-VIII). phototropin light receptor.... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR000014 PAS 144 240
IPR000014 PAS 423 518
IPR000719 Prot_kinase_dom 597 881
No external refs found!