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  5. LOC_Os11g43900.1

LOC_Os11g43900.1 (LOC_Os11g43900)


Aliases : LOC_Os11g43900

Description : Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica (sp|p35681|tctp_orysj : 303.0)


Gene families : OG0002540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g43900.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00225280 TCTP,... Translationally-controlled tumor protein homolog... 0.03 OrthoFinder output from all 47 species
AT3G16640 TCTP translationally controlled tumor protein 0.12 OrthoFinder output from all 47 species
Ala_g21661 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g14653 TCTP not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g09690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01960 TCTP not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01017723001 No alias Translationally-controlled tumor protein homolog... 0.06 OrthoFinder output from all 47 species
Len_g38315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36691 TCTP not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_724304g0010 No alias Translationally-controlled tumor protein homolog... 0.06 OrthoFinder output from all 47 species
Mp2g26040.1 TCTP Translationally-controlled tumor protein homolog... 0.05 OrthoFinder output from all 47 species
Nbi_g38387 TCTP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12787 TCTP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00499 TCTP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g099770.3.1 Solyc01g099770 Translationally-controlled tumor protein homolog... 0.11 OrthoFinder output from all 47 species
Spa_g00314 TCTP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013417_P002 TCTP, Zm00001e013417 Translationally-controlled tumor protein homolog OS=Zea... 0.04 OrthoFinder output from all 47 species
Zm00001e013418_P001 TCTP, Zm00001e013418 Translationally-controlled tumor protein homolog OS=Zea... 0.04 OrthoFinder output from all 47 species
Zm00001e013419_P001 TCTP, Zm00001e013419 Translationally-controlled tumor protein homolog OS=Zea... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018105 Translational_control_tumour_p 1 164
No external refs found!