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  5. LOC_Os11g37640.1

LOC_Os11g37640.1 (ARFC1, ATARFC1, LOC_Os11g37640)


Aliases : ARFC1, ATARFC1, LOC_Os11g37640

Description : ARF-GTPase


Gene families : OG0004857 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004857_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g37640.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269620 ARFC1, ATARFC1,... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
AT3G22950 ARFC1, ATARFC1 ADP-ribosylation factor C1 0.06 OrthoFinder output from all 47 species
Adi_g009757 ARFC1, ATARFC1 ARF-GTPase *(ARFC) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058297 ARFC1, ATARFC1 ARF-GTPase *(ARFC) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06986 ARFC1, ATARFC1 ARF-GTPase *(ARFC) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00351 ARFC1, ATARFC1 ARF-GTPase *(ARFC) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_24308 ARFC1, ATARFC1 ARF-GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 14 176
No external refs found!