Aliases : LOC_Os11g34190
Description : no hits & (original description: none)
Gene families : OG0006156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os11g34190.1 | |
Cluster | HCCA: Cluster_58 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G44780 | No alias | CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ... | 0.05 | OrthoFinder output from all 47 species | |
AT4G08310 | No alias | FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... | 0.05 | OrthoFinder output from all 47 species | |
Aev_g01018 | No alias | histone chaperone *(CHZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g05052 | No alias | histone chaperone *(CHZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene31920.t1 | Aspi01Gene31920 | histone chaperone *(CHZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.27G053000.1 | Ceric.27G053000 | histone chaperone *(CHZ) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g02150 | No alias | histone chaperone *(CHZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01008886001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Mp3g14690.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g10897 | No alias | histone chaperone *(CHZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo403074 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Smo422645 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g012920.3.1 | Solyc11g012920 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e011187_P001 | Zm00001e011187 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003729 | mRNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
CC | GO:0005685 | U1 snRNP | IEP | HCCA |
CC | GO:0005694 | chromosome | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR019098 | Histone_chaperone_domain_CHZ | 390 | 422 |
No external refs found! |