LOC_Os11g34190.1 (LOC_Os11g34190)


Aliases : LOC_Os11g34190

Description : no hits & (original description: none)


Gene families : OG0006156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006156_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g34190.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT1G44780 No alias CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ... 0.05 OrthoFinder output from all 47 species
AT4G08310 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 OrthoFinder output from all 47 species
Aev_g01018 No alias histone chaperone *(CHZ) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05052 No alias histone chaperone *(CHZ) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31920.t1 Aspi01Gene31920 histone chaperone *(CHZ) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G053000.1 Ceric.27G053000 histone chaperone *(CHZ) & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g02150 No alias histone chaperone *(CHZ) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008886001 No alias No description available 0.03 OrthoFinder output from all 47 species
Mp3g14690.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g10897 No alias histone chaperone *(CHZ) & original description: none 0.02 OrthoFinder output from all 47 species
Smo403074 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo422645 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc11g012920.3.1 Solyc11g012920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011187_P001 Zm00001e011187 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR019098 Histone_chaperone_domain_CHZ 390 422
No external refs found!